11536 DDE_Tnp_1_7 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
11536 chr_20 DDE_Tnp_1_7 superfamily 384461 386384 + DDE_Tnp_1_7 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7443367 Thaps11536.4, Thaps11536.1, Thaps11536.3, Thaps11536.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0342

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0072
 0.37

Most Highly Correlated Transcripts

bd771

(bd771) NA
0.9026

bd788

(bd788) NA
0.9018

bd1098

(bd1098) NA
0.8907

bd813

(bd813) NA
0.8863

263938

FG-GAP_2
0.8701

9345

hypothetical protein
0.865

3981

hypothetical protein
0.8586

bd633

(bd633) NA
0.8537

bd1097

(bd1097) NA
0.8521

9642

hypothetical protein
0.8493

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DDE_Tnp_1_7 superfamily Transposase IS4; Transposase IS4. - 84.6282 4.02E-18 175 - 476 superfamily 258117

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 247287 Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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