11693 tRNA_SAD superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
11693	chr_22	tRNA_SAD superfamily	144419	145309	-	tRNA_SAD superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7449479	Thaps11693.3, Thaps11693.1, Thaps11693.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0142

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0280	0.36	1.3 15

Most Highly Correlated Transcripts

22850 DUF4239 0.928	11294 XendoU 0.9057	10059 hypothetical protein 0.8873	21603 hypothetical protein 0.8728	34514 PLN02539 0.8723	3842 hypothetical protein 0.8627
10889 hypothetical protein 0.8614	20665 hypothetical protein 0.8606	1985 hypothetical protein 0.8605	21722 Aldo_ket_red 0.8559

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
tRNA_SAD superfamily		Threonyl and Alanyl tRNA synthetase second additional domain; The catalytically active from of...	-	287.75	1.00E-97	46 - 253	superfamily	263673

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_35813	PHATRDRAFT_35813	Not available	250503	Not available	Not available	AT3G16565.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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