11709 SGNH_hydrolase superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
11709 chr_22 SGNH_hydrolase superfamily 200674 202362 - SGNH_hydrolase superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7442792 Thaps11709.1, Thaps11709.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0482

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0062
 0.41

Most Highly Correlated Transcripts

bd1835

(bd1835) NA
0.9044

bd692

(bd692) NA
0.8745

8825

hypothetical protein
0.844

23368

hypothetical protein
0.841

7335

hypothetical protein
0.8355

7830

7tm_3 superfamily
0.8315

11306

hypothetical protein
0.8303

263695

Peroxin-3 superfamily
0.8295

bd1802

(bd1802) NA
0.8293

20611

hypothetical protein
0.8287

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SGNH_hydrolase superfamily SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold... - 81.9518 5.46E-18 196 - 481 superfamily 260768

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 233083 178132 442594 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments