11806 TRAM_LAG1_CLN8
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
11806 chr_22 TRAM_LAG1_CLN8 500917 502381 - TRAM_LAG1_CLN8

Synonyms

NCBI ID Ensembl Genomes exon ID
7442841 Thaps11806.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0085

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0155
 0.30

Most Highly Correlated Transcripts

bd1214

(bd1214) KISc_C_terminal
0.957

bd1081

(bd1081) NA
0.9304

bd439

(bd439) POLBc_alpha
0.9263

bd950

(bd950) NA
0.9234

bd843

(bd843) NA
0.9106

bd1983

(bd1983) RecA-like_NTPases superfamily
0.9071

bd765

(bd765) NA
0.8991

bd1173

(bd1173) S_TKc
0.8948

30105

(FPS1) Trans_IPPS_HT
0.8923

3318

hypothetical protein
0.8877

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TRAM_LAG1_CLN8 TLC domain; TLC domain. cl02759 95.426 7.63E-23 193 - 430 specific 252170
TRAM_LAG1_CLN8 superfamily TLC domain; TLC domain. - 95.426 7.63E-23 193 - 430 superfamily 261432

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_46595 PHATRDRAFT_46595 187842 163077 Not available Cre17.g726400.t1.1 AT1G26200.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0016021 GO:0050291 -

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

GO:0050291

sphingosine N-acyltransferase activity

Details: 
Catalysis of the reaction: acyl-CoA + sphingosine = CoA + N-acylsphingosine.
GO Category: 
MF

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