bd1983 (bd1983) RecA-like_NTPases superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
bd1983 bd_7x47 (bd1983) RecA-like_NTPases superfamily 11568 14726 + RecA-like_NTPases superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0058

Most Highly Correlated Transcripts

9684

TIMELESS superfamily
0.9944

23064

hypothetical protein
0.9918

1111

GINS_A_psf3
0.9918

5431

hypothetical protein
0.9916

4688

hypothetical protein
0.9912

21159

hypothetical protein
0.9894

32555

RNRR2
0.9875

1393

(CAP1) Smc
0.9861

36441

CYCLIN
0.9851

269422

wd-40 repeat-containing protein
0.985

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TOPRIM_primases TOPRIM_primases: The topoisomerase-primase (TORPIM) nucleotidyl transferase/hydrolase domain found... cl00718 68.451 5.44E-14 296 - 372 specific 173779
TOPRIM superfamily Topoisomerase-primase domain. This is a nucleotidyl transferase/hydrolase domain found in type IA,... - 68.451 5.44E-14 296 - 372 superfamily 260587
RecA-like_NTPases superfamily RecA-like NTPases. This family includes the NTP binding domain of F1 and V1 H+ATPases, DnaB and... - 233.828 1.05E-70 424 - 689 superfamily 266574

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available AT1G30680.1 479432

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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