11993 CGS_like
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
11993 chr_23 CGS_like 81225 82688 + CGS_like

Synonyms

NCBI ID Ensembl Genomes exon ID
7448269 Thaps11993.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0043

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0032
 0.47

Most Highly Correlated Transcripts

268062

PRK14293
0.8247

bd1945

(bd1945) NA
0.8032

35164

acolac_lg
0.7732

270373

hypothetical protein
0.7635

36525

PRK09427
0.7604

26051

(GLNA) PLN02284
0.7556

262914

(HSP90_2) HSP90 superfamily
0.7496

39941

PRK13357
0.7493

261823

FIG superfamily
0.7453

269704

PRK09225
0.7419

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step... cl18945 400.81 2.51E-136 63 - 475 specific 99738
AAT_I superfamily Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent... - 400.81 2.51E-136 63 - 475 superfamily 267298

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 259901 21992 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006520 GO:0003962 -

GO:0006520

cellular amino acid metabolic process

Details: 
The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells.
GO Category: 
BP

GO:0003962

cystathionine gamma-synthase activity

Details: 
Catalysis of the reaction: O-succinyl-L-homoserine + L-cysteine = cystathionine + succinate.
GO Category: 
MF

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