13149 (DIC2) WD40 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
13149 chr_6 (DIC2) WD40 superfamily 1899479 1901788 - WD40 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7446352 Thaps13149.1, Thaps13149.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0322

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0070
 0.44

Most Highly Correlated Transcripts

bd654

(bd654) Sec1 superfamily
0.764

31145

COG4581
0.7132

bd706

(bd706) NA
0.713

23836

hypothetical protein
0.7117

bd168

(bd168) Peptidase_S9 superfamily
0.6968

264282

Motor_domain superfamily
0.6944

263046

HA
0.6941

260818

DUF1126 superfamily
0.6928

22442

CHD
0.6925

264498

PRK00142
0.6896

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 92.398 1.10E-20 352 - 631 superfamily 238121
COG2319 FOG: WD40 repeat [General function prediction only] - 89.3775 5.57E-19 351 - 689 multi-dom 225201

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available 115368 Cre12.g536550.t1.2 Not available 470453

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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