13482 PLN02830
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
13482 chr_6 PLN02830 1367970 1370758 - PLN02830

Synonyms

NCBI ID Ensembl Genomes exon ID
7453283 Thaps13482.1, Thaps13482.2, Thaps13482.3, Thaps13482.4

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0066

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0256
 0.42

Most Highly Correlated Transcripts

bd1306

(bd1306) NA
0.9386

bd208

(bd208) DUF3529
0.9301

bd687

(bd687) NA
0.9292

bd1380

(bd1380) ycf39
0.9215

bd843

(bd843) NA
0.9204

bd211

(bd211) Maf_Ham1 superfamily
0.9153

bd890

(bd890) NA
0.9103

bd846

(bd846) NA
0.9036

bd1078

(bd1078) NA
0.9034

bd1820

(bd1820) Fasciclin
0.9016

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PLN02830 UDP-sugar pyrophosphorylase cl11394 992.652 0 153 - 774 specific 215444
Glyco_tranf_GTA_type superfamily Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a... - 992.652 0 153 - 774 superfamily 264347

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_54493 PHATRDRAFT_54493 204039 241196 427850 Cre14.g621751.t1.1 AT5G52560.1 Not available

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

Not available -

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