14708 DRE_TIM_metallolyase superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
14708 chr_19b_31 DRE_TIM_metallolyase superfamily 35457 36935 + DRE_TIM_metallolyase superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7444381 Thaps14708.1, Thaps14708.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0285

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0251
 0.43

Most Highly Correlated Transcripts

262692

0.9438

36007

Aldolase_II superfamily
0.9134

2332

PTZ00340
0.9057

268443

SAICAR_synt_Sc
0.9043

29183

PRK12344
0.9022

4108

hypothetical protein
0.8907

19158

GRX_PICOT_like
0.8864

4372

hypothetical protein
0.8856

38472

HA2
0.8848

36650

hypothetical protein
0.8824

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DRE_TIM_metallolyase superfamily DRE-TIM metallolyase superfamily; The DRE-TIM metallolyase superfamily includes 2-isopropylmalate... - 219.223 1.98E-66 160 - 465 superfamily 267315
Radical_SAM Radical SAM superfamily; Radical SAM proteins catalyse diverse reactions, including unusual... - 65.2491 1.28E-12 214 - 387 multi-dom 252342

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_13537 PHATR_13537 215449 265142 77468 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003824 GO:0005506 -

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

GO:0005506

iron ion binding

Details: 
Interacting selectively and non-covalently with iron (Fe) ions.
GO Category: 
MF

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