1471 Sec5
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
1471 chr_1 Sec5 1607500 1611344 + Sec5

Synonyms

NCBI ID Ensembl Genomes exon ID
7445137 Thaps1471.1, Thaps1471.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0165

Most Highly Correlated Transcripts

5660

hypothetical protein
0.8951

8130

hypothetical protein
0.8927

6898

hypothetical protein
0.8913

22533

hypothetical protein
0.8827

6378

hypothetical protein
0.8751

23339

hypothetical protein
0.875

1172

hypothetical protein
0.8736

22837

hypothetical protein
0.8694

4333

hypothetical protein
0.8686

4660

Glyco_tranf_GTA_type superfamily
0.8686

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Sec5 Exocyst complex component Sec5; This Sec5 family of eukaryotic proteins conserved is not... cl19297 123.489 1.64E-31 467 - 630 specific 259600
COG2 superfamily COG (conserved oligomeric Golgi) complex component, COG2; The COG complex comprises eight proteins... - 123.489 1.64E-31 467 - 630 superfamily 267650

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 241085 294835 Not available Not available AT1G21170.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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