14875 GT_GPT_euk
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
14875 chr_3 GT_GPT_euk 2372988 2379596 + GT_GPT_euk

Synonyms

NCBI ID Ensembl Genomes exon ID
7443841 Thaps14875.3, Thaps14875.1, Thaps14875.2, Thaps14875.4

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0215

Most Highly Correlated Transcripts

3348

hypothetical protein
0.8981

34925

SNF2_N
0.8948

261607

IF4E
0.8925

4192

hypothetical protein
0.8908

3854

hypothetical protein
0.8897

4915

hypothetical protein
0.8883

5217

hypothetical protein
0.884

30701

PRK05279
0.8779

2467

COG5325
0.8773

19826

LSm1
0.877

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GT_GPT_euk UDP-GlcNAc:dolichol-P GlcNAc-1-P transferase (GPT) catalyzes the transfer of GlcNAc-1-P from UDP-... cl10571 385.446 4.74E-132 112 - 394 specific 133465
GT_MraY-like superfamily Glycosyltransferase 4 (GT4) includes both eukaryotic and prokaryotic UDP-D-N-acetylhexosamine:... - 385.446 4.74E-132 112 - 394 superfamily 264002

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_9724 PHATRDRAFT_9724 187013 318218 64643 Cre16.g663100.t1.1 AT2G41490.1 352487

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0003824 GO:0006629 GO:0016020 GO:0003975 -

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

GO:0006629

lipid metabolic process

Details: 
The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

GO:0003975

UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity

Details: 
Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + dolichyl phosphate = UMP + N-acetyl-D-glucosaminyl-diphosphodolichol.
GO Category: 
MF

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