15887 STKc_CDK7
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
15887 chr_2 STKc_CDK7 1526594 1527562 - STKc_CDK7

Synonyms

NCBI ID Ensembl Genomes exon ID
7443066 Thaps15887.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0401

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0056
 0.44

Most Highly Correlated Transcripts

bd1934

(bd1934) NA
0.8952

bd885

(bd885) NA
0.8923

bd690

(bd690) NA
0.8713

bd1840

(bd1840) NA
0.8604

bd415

(bd415) arom_aa_hydroxylase superfamily
0.8601

bd1801

(bd1801) NA
0.8442

bd738

(bd738) NA
0.8386

bd1841

(bd1841) CAP10 superfamily
0.837

bd1692

(bd1692) NA
0.8366

2064

hypothetical protein
0.8337

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7; Serine/... cl09925 473.601 1.60E-168 19 - 317 specific 143346
PKc_like superfamily Protein Kinases, catalytic domain; The protein kinase superfamily is mainly composed of the... - 473.601 1.60E-168 19 - 317 superfamily 263920
PTZ00024 cyclin-dependent protein kinase; Provisional - 282.805 3.93E-93 24 - 317 multi-dom 240233

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_10160 PHATRDRAFT_10160 226143 287628 Not available Cre09.g388000.t1.2 AT1G66750.1 565400

KEGG

KEGG description KEGG Pathway
Nucleotide excision repair map03420

GO Terms

GO:0004672 GO:0005524 GO:0006468 GO:0004713 GO:0004674 -

GO:0004672

protein kinase activity

Details: 
Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0006468

protein phosphorylation

Details: 
The process of introducing a phosphate group on to a protein.
GO Category: 
BP

GO:0004713

protein tyrosine kinase activity

Details: 
Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate.
GO Category: 
MF

GO:0004674

protein serine/threonine kinase activity

Details: 
Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.
GO Category: 
MF

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