1621 SNAP
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
1621 chr_1 SNAP 2005187 2006866 - SNAP

Synonyms

NCBI ID Ensembl Genomes exon ID
7445309 Thaps1621.1, Thaps1621.3, Thaps1621.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0286

Most Highly Correlated Transcripts

37497

cysE
0.8737

30701

PRK05279
0.8698

3570

PP2Cc
0.8652

39232

PP2Cc
0.8622

2073

hypothetical protein
0.8622

36007

Aldolase_II superfamily
0.8606

261041

ATE_C
0.8585

261567

TPR
0.8555

4295

hypothetical protein
0.854

32216

(RT5) rpsE_bact
0.852

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SNAP Soluble NSF attachment protein, SNAP; The soluble NSF attachment protein (SNAP) proteins are... - 87.6044 1.01E-19 50 - 321 multi-dom 259075

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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