1843 Bestrophin
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
1843 chr_1 Bestrophin 2561285 2562813 - Bestrophin

Synonyms

NCBI ID Ensembl Genomes exon ID
7449148 Thaps1843.1, Thaps1843.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0277

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0037
 0.54

Most Highly Correlated Transcripts

bd779

(bd779) SCP superfamily
0.7958

24385

hypothetical protein
0.7945

bd827

(bd827) NA
0.7776

bd1822

(bd1822) SCP superfamily
0.7158

3250

hypothetical protein
0.7126

21234

hypothetical protein
0.7011

25548

hypothetical protein
0.6999

25414

hypothetical protein
0.6868

23861

hypothetical protein
0.6863

10938

hypothetical protein
0.6777

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Bestrophin Bestrophin, RFP-TM, chloride channel; Bestrophin is a 68-kDa basolateral plasma membrane protein... cl01544 168.087 4.77E-48 96 - 410 specific 250333
Bestrophin superfamily Bestrophin, RFP-TM, chloride channel; Bestrophin is a 68-kDa basolateral plasma membrane protein... - 168.087 4.77E-48 96 - 410 superfamily 260991

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available 242012 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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