18613 S14_ClpP_2
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
18613 chr_6 S14_ClpP_2 1545798 1546550 + S14_ClpP_2

Synonyms

NCBI ID Ensembl Genomes exon ID
7444550 Thaps18613.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0013

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0242
 0.38

Most Highly Correlated Transcripts

23341

hypothetical protein
0.8772

25019

hypothetical protein
0.8618

4318

TIM21 superfamily
0.857

268453

PRK11183
0.8554

263883

hypothetical protein
0.8534

928

LPLAT superfamily
0.8526

36099

IscU_like
0.8525

22846

hypothetical protein
0.8514

263182

DUF1350 superfamily
0.8415

5563

hypothetical protein
0.839

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
S14_ClpP_2 Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease; Clp protease (... cl15763 209.605 5.90E-68 11 - 185 specific 132928
Clp_protease_like superfamily Caseinolytic protease (ClpP) is an ATP-dependent protease; Clp protease (caseinolytic protease;... - 209.605 5.90E-68 11 - 185 superfamily 265774

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_45773 PHATRDRAFT_45773 200282 234602 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006508 GO:0008462 -

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0008462

NA

Details: 
NA
GO Category: 
NA

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