1882 Gn_AT_II superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
1882 chr_1 Gn_AT_II superfamily 2649684 2651973 - Gn_AT_II superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7445095 Thaps1882.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0353

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0097
 0.39

Most Highly Correlated Transcripts

261059

hypothetical protein
0.9218

11921

hypothetical protein
0.9211

2065

hypothetical protein
0.9182

36640

DEXDc
0.9131

33225

MYSc
0.9119

262171

CAP_ED
0.9096

262645

Glyco_18
0.9087

263786

(ZFP20) zf-TAZ
0.9049

7771

hypothetical protein
0.9037

263859

GH18_chitinase-like superfamily
0.9023

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Asn_Synthase_B_C The C-terminal domain of Asparagine Synthase B. This domain is always found associated n-terminal... cl00292 104.423 1.22E-24 328 - 726 specific 238949
AANH_like superfamily Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases, ATP sulphurylases... - 104.423 1.22E-24 328 - 726 superfamily 260331
Gn_AT_II superfamily Glutamine amidotransferases class-II (GATase). The glutaminase domain catalyzes an amide nitrogen... - 112.38 3.49E-28 1 - 276 superfamily 260351

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_49902 PHATRDRAFT_49902 144796 302922 423585 Cre07.g321050.t1.1 AT2G03667.1 483651

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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