20651 MATE_like superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
20651 chr_1 MATE_like superfamily 578768 580936 + MATE_like superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7442903 Thaps20651.2, Thaps20651.3, Thaps20651.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0177

Most Highly Correlated Transcripts

12899

AAA
0.9367

13448

Sec1
0.9131

16295

FBPase
0.9128

264556

FBPase
0.9044

2186

ERG4_ERG24 superfamily
0.9012

32226

CLPTM1 superfamily
0.9007

32782

MPN superfamily
0.8979

21271

hypothetical protein
0.8931

16114

PLN02350
0.8872

35728

FtsZ_type1
0.8841

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MATE_like superfamily Multidrug and toxic compound extrusion family and similar proteins; The integral membrane proteins... - 206.643 1.12E-59 165 - 596 superfamily 263758
NorM Na+-driven multidrug efflux pump [Defense mechanisms] - 160.468 3.82E-43 167 - 595 multi-dom 223608

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 229891 317538 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006855 GO:0015238 GO:0015297 GO:0016020 -

GO:0006855

drug transmembrane transport

Details: 
The process in which a drug is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0015238

drug transmembrane transporter activity

Details: 
Enables the directed movement of a drug from one side of a membrane to the other. A drug is any naturally occurring or synthetic substance, other than a nutrient, that, when administered or applied to an organism, affects the structure or functioning of the organism; in particular, any such substance used in the diagnosis, prevention, or treatment of disease.
GO Category: 
MF

GO:0015297

antiporter activity

Details: 
Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out).
GO Category: 
MF

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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