20799 LUC7Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
20799	chr_1	LUC7	1335475	1336901	+	LUC7

Synonyms

NCBI ID	Ensembl Genomes exon ID
7442894	Thaps20799.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0471

Most Highly Correlated Transcripts

5101 UbiE 0.8992	4599 hypothetical protein 0.8947	1676 hypothetical protein 0.8942	2622 hypothetical protein 0.8929	20639 hypothetical protein 0.892	21633 ccl1 0.8914
6823 COG2 superfamily 0.8908	13448 Sec1 0.8878	10487 hypothetical protein 0.8865	31822 WD40 0.8829

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
LUC7		LUC7 N_terminus; This family contains the N terminal region of several LUC7 protein homologues and...	-	74.3746	2.09E-15	2 - 377	multi-dom	251790

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_46402	PHATRDRAFT_46402	209432	264030	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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