20800 XRN_N superfamily
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
20800 chr_1 XRN_N superfamily 1343621 1346757 + XRN_N superfamily
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0317
Normalized Mean Residue
Thaps_bicluster_0147
0.38
COG1204
0.8963
(Helicase_2) UvrD-helicase
0.8837
efThoc1 superfamily
0.8775
PKc_like superfamily
0.8769
hypothetical protein
0.8766
hypothetical protein
0.8758
YSH1
0.871
PTZ00018
0.8698
hypothetical protein
0.8655
(Tp_Hox6a) zf-CW
0.864
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
XRN_N superfamily XRN 5'-3' exonuclease N-terminus; This family aligns residues towards the N-... - 83.5403 8.32E-18 197 - 391 superfamily 251765
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 245686 298966 Not available Not available Not available Not available
KEGG description KEGG Pathway
Not available Not available
GO:0008856 GO:0008858 GO:0008997 GO:0016895 -

exodeoxyribonuclease X activity

Details: 
Catalysis of the endonucleolytic cleavage of supercoiled plasma DNA to linear DNA duplexes.
GO Category: 
MF

NA

Details: 
NA
GO Category: 
NA

ribonuclease R activity

Details: 
Catalysis of the reaction: RNA + H2O = 5'-phosphomononucleotides. Cleaves RNA in the 3' to 5' direction, leaving an undigested core of 3-5 nucleotides.
GO Category: 
MF

exodeoxyribonuclease activity, producing 5'-phosphomonoesters

Details: 
Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acids by removing nucleotide residues from the 3' or 5' end to yield 5' phosphomonoesters.
GO Category: 
MF
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