2086 zf-UBPThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
2086	chr_2	zf-UBP	128820	131219	+	zf-UBP

Synonyms

NCBI ID	Ensembl Genomes exon ID
7442185	Thaps2086.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0137

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0136	0.28	27 1100

Most Highly Correlated Transcripts

264628 UxaC 0.9332	263558 Menin superfamily 0.9176	1850 PKc_like superfamily 0.9176	24829 Ubox 0.9125	3837 UshA 0.9047	20664 hypothetical protein 0.9035
5659 hypothetical protein 0.8974	6594 hypothetical protein 0.8961	10158 hypothetical protein 0.8935	3913 LCM 0.8875

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
zf-UBP			cl09957	83.1295		454 - 516	specific	251121
zf-UBP superfamily			-	83.1295		454 - 516	superfamily	263936

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_35196	PHATRDRAFT_35196	188525	198424	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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