20927 RhaT
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
20927 chr_1 RhaT 2055808 2057247 + RhaT

Synonyms

NCBI ID Ensembl Genomes exon ID
7453397 Thaps20927.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0112

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0291
 0.48

Most Highly Correlated Transcripts

bd1839

(bd1839) NA
0.9304

bd1756

(bd1756) NA
0.9223

270222

0.8919

1463

hypothetical protein
0.8862

bd415

(bd415) arom_aa_hydroxylase superfamily
0.8798

bd1946

(bd1946) NA
0.873

bd1840

(bd1840) NA
0.8723

bd1790

(bd1790) NA
0.8596

bd1934

(bd1934) NA
0.8582

35541

Cis_IPPS
0.8571

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and... - 98.4 2.62E-23 163 - 418 multi-dom 223769

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available 288647 Not available Not available Not available 473735

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0016020 -

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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