2094 Cyt_C5_DNA_methylase superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
2094 chr_2 Cyt_C5_DNA_methylase superfamily 148174 149451 - Cyt_C5_DNA_methylase superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7442189 Thaps2094.1, Thaps2094.3, Thaps2094.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0294

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0254
 0.29

Most Highly Correlated Transcripts

bd1069

(bd1069) NA
0.8799

16947

DEXDc superfamily
0.8038

22685

COG2520
0.7996

262731

hypothetical protein
0.7748

263669

UvrD
0.7747

263034

WD40-repeat protein
0.7715

9384

hypothetical protein
0.7673

16287

Pkinase
0.7634

5794

hypothetical protein
0.7629

23865

CE4_SF superfamily
0.7562

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Cyt_C5_DNA_methylase superfamily Cytosine-C5 specific DNA methylases; Methyl transfer reactions play an important role in many... - 112.714 7.86E-29 216 - 330 superfamily 267448

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_47357 PHATRDRAFT_47357 148014 170853 56747 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003677 GO:0006306 -

GO:0003677

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

GO:0006306

DNA methylation

Details: 
The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine.
GO Category: 
BP

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