20977 COG0398
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
20977 chr_1 COG0398 2307471 2310146 - COG0398

Synonyms

NCBI ID Ensembl Genomes exon ID
7453418 Thaps20977.1, Thaps20977.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0137

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0271
 0.35

Most Highly Correlated Transcripts

3842

hypothetical protein
0.9183

4179

hypothetical protein
0.9133

5659

hypothetical protein
0.9119

8348

Peptidase_C97
0.9102

5212

(Tp_CCCH26) regulator [Rayko]
0.9047

6552

hypothetical protein
0.9004

3071

NA
0.8979

11386

hypothetical protein
0.8936

8199

LRR_RI superfamily
0.8915

5182

hypothetical protein
0.89

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
COG0398 Uncharacterized conserved protein [Function unknown] cl00429 102.403 3.15E-24 307 - 498 specific 223475
SNARE_assoc superfamily SNARE associated Golgi protein; This is a family of SNARE associated Golgi proteins. The yeast... - 102.403 3.15E-24 307 - 498 superfamily 260418

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 161390 Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005554 GO:0016020 -

GO:0005554

NA

Details: 
NA
GO Category: 
NA

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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