21390 PS_II_psbQ_bact superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
21390 chr_2 PS_II_psbQ_bact superfamily 1589993 1590910 + PS_II_psbQ_bact superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7446678 Thaps21390.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0484

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0154
 0.36

Most Highly Correlated Transcripts

bd1803

(bd1803) NA
0.9584

bd1891

(bd1891) COG3899
0.9142

bd1749

(bd1749) NA
0.8945

bd739

(bd739) NA
0.8783

bd740

(bd740) NA
0.8675

bd1802

(bd1802) NA
0.8672

bd1821

(bd1821) NA
0.8429

23685

hypothetical protein
0.799

35916

Nudix_Hydrolase superfamily
0.7776

bd945

(bd945) COG3899
0.7718

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PS_II_psbQ_bact superfamily photosystem II protein PsbQ; This protein through the member sll1638 from Synechocystis sp. PCC... - 62.4083 4.43E-13 86 - 186 superfamily 132086

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 188658 158798 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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