2141 SGNH_hydrolase superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
2141 chr_2 SGNH_hydrolase superfamily 280351 281848 - SGNH_hydrolase superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7442213 Thaps2141.3, Thaps2141.2, Thaps2141.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0411

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0058
 0.44

Most Highly Correlated Transcripts

4108

hypothetical protein
0.9761

bd415

(bd415) arom_aa_hydroxylase superfamily
0.9396

bd410

(bd410) HNHc
0.9373

bd1841

(bd1841) CAP10 superfamily
0.9272

bd1808

(bd1808) NA
0.8913

bd1941

(bd1941) NA
0.8855

bd1793

(bd1793) NA
0.8496

263864

0.8374

bd1842

(bd1842) NA
0.8097

bd643

(bd643) NA
0.8094

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SGNH_hydrolase superfamily SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold... - 61.5126 2.80E-11 145 - 233 superfamily 260768

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_50268 PHATRDRAFT_50268 Not available 325882 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003824 -

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

Add comment

Log in to post comments