21489 Y_phosphatase3Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
21489	chr_2	Y_phosphatase3	2030129	2031667	+	Y_phosphatase3

Synonyms

NCBI ID	Ensembl Genomes exon ID
7452496	Thaps21489.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0027

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0169	0.34	13 7.7

Most Highly Correlated Transcripts

bd718 (bd718) PRK10387 0.9446	bd1161 (bd1161) NA 0.93	4516 hypothetical protein 0.9204	25040 NA 0.9198	9512 PTZ00168 0.909	6028 NA 0.9068
24152 arginine n-methyltransferase-like protein 0.9027	bd1306 (bd1306) NA 0.9021	262977 NA 0.8998	262254 Uup 0.8977

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Y_phosphatase3		Tyrosine phosphatase family; This family is closely related to the pfam00102 and pfam00782 families.	cl19170	78.3183	3.02E-17	91 - 371	specific	257679
Y_phosphatase3 superfamily		Tyrosine phosphatase family; This family is closely related to the pfam00102 and pfam00782 families.	-	78.3183	3.02E-17	91 - 371	superfamily	267523

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_45376	PHATRDRAFT_45376	179260	310279	Not available	Cre03.g165300.t1.1	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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