21517 Methyltransf_6 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
21517 chr_2 Methyltransf_6 superfamily 2181440 2183836 - Methyltransf_6 superfamily

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0015

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0204
 0.18

Most Highly Correlated Transcripts

bd1820

(bd1820) Fasciclin
0.978

bd1387

(bd1387) psbE
0.9692

bd1863

(bd1863) NA
0.9624

bd1160

(bd1160) Chloroa_b-bind superfamily
0.9621

bd1306

(bd1306) NA
0.962

bd208

(bd208) DUF3529
0.9608

bd1304

(bd1304) Ycf4
0.9576

bd1403

(bd1403) NA
0.9558

bd1380

(bd1380) ycf39
0.9482

bd218

(bd218) Chloroa_b-bind superfamily
0.9456

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Methyltransf_6 superfamily Demethylmenaquinone methyltransferase; Members of this family are demethylmenaquinone... - 118.464 1.66E-30 293 - 506 superfamily 260452
NADB_Rossmann superfamily Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD... - 71.8885 1.48E-14 105 - 222 superfamily 263925

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_44651 PHATRDRAFT_44651 222425 6554 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003677 GO:0006306 -

GO:0003677

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

GO:0006306

DNA methylation

Details: 
The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine.
GO Category: 
BP

Add comment

Log in to post comments