21713 UbiH
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
21713 chr_3 UbiH 772838 774582 + UbiH

Synonyms

NCBI ID Ensembl Genomes exon ID
7444744 Thaps21713.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0137

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0105
 0.42

Most Highly Correlated Transcripts

23170

hypothetical protein
0.9366

3204

hypothetical protein
0.9328

10963

hypothetical protein
0.9212

5038

DUF179
0.921

35956

SIR2 superfamily
0.9148

6693

hypothetical protein
0.9133

5659

hypothetical protein
0.9126

7696

2_5_RNA_ligase2
0.9107

23514

hypothetical protein
0.91

10856

hypothetical protein
0.9099

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NAD_binding_8 superfamily NAD(P)-binding Rossmann-like domain; NAD(P)-binding Rossmann-like domain. - 80.0524 1.05E-16 116 - 501 superfamily 267487
UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme... - 130.981 1.05E-33 112 - 527 multi-dom 223727

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 268078 Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004497 GO:0006725 GO:0006118 GO:0008152 GO:0016491 GO:0004502 -

GO:0004497

monooxygenase activity

Details: 
Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water.
GO Category: 
MF

GO:0006725

cellular aromatic compound metabolic process

Details: 
The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons, as carried out by individual cells.
GO Category: 
BP

GO:0006118

NA

Details: 
NA
GO Category: 
NA

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0004502

kynurenine 3-monooxygenase activity

Details: 
Catalysis of the reaction: L-kynurenine + H(+) + NADPH + O(2) = 3-hydroxy-L-kynurenine + H(2)O + NADP(+).
GO Category: 
MF

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