22096 SOULThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
22096	chr_4	SOUL	262779	264343	-	SOUL

Synonyms

NCBI ID	Ensembl Genomes exon ID
7442061	Thaps22096.1, Thaps22096.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0196

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0202	0.30	4.4 510

Most Highly Correlated Transcripts

270222 0.9299	bd789 (bd789) ABC_ATPase superfamily 0.9039	16295 FBPase 0.9027	7546 COG1505 0.8974	269937 M1_APN_2 0.8844	4767 hypothetical protein 0.884
9880 SGNH_hydrolase superfamily 0.8801	882 hypothetical protein 0.878	3354 hypothetical protein 0.8772	25677 MgtE superfamily 0.8756

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
SOUL superfamily		SOUL heme-binding protein; This family represents a group of putative heme-binding proteins. Our...	-	134.305	4.78E-37	255 - 434	superfamily	252825
SOUL superfamily		SOUL heme-binding protein; This family represents a group of putative heme-binding proteins. Our...	-	134.305	4.78E-37	255 - 434	superfamily	252825

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_bd1699	PHATRDRAFT_bd1699	176330	257155	439471	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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