22108 Bac_rhamnosid superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
22108 chr_4 Bac_rhamnosid superfamily 311566 315956 - Bac_rhamnosid superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7442070 Thaps22108.1, Thaps22108.3, Thaps22108.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0378

Most Highly Correlated Transcripts

bd1078

(bd1078) NA
0.9219

bd1893

(bd1893) NA
0.9122

24873

hypothetical protein
0.9049

bd951

(bd951) NA
0.9019

24035

Peptidase_C19 superfamily
0.8928

bd758

(bd758) NA
0.8923

21268

zf-CXXC
0.8839

22931

Glycos_transf_1 superfamily
0.8834

8535

hypothetical protein
0.882

12836

EEP superfamily
0.8816

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Bac_rhamnosid superfamily Bacterial alpha-L-rhamnosidase; This family consists of bacterial rhamnosidase A and B enzymes. L-... - 188.634 1.13E-50 627 - 1209 superfamily 253267
Bac_rhamnosid_N superfamily Alpha-L-rhamnosidase N-terminal domain; This family consists of bacterial rhamnosidase A and B... - 86.1961 7.45E-19 391 - 541 superfamily 254858

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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