2233 (atpC_1) V_ATP_synt_C
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
2233 chr_2 (atpC_1) V_ATP_synt_C 500132 500762 + V_ATP_synt_C
NCBI ID Ensembl Genomes exon ID
7448667 Thaps2233.2, Thaps2233.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0211
Normalized Mean Residue
Thaps_bicluster_0131
0.35
ATP-synt_C superfamily
0.9167
hypothetical protein
0.9027
hypothetical protein
0.9018
hypothetical protein
0.9001
P4Hc
0.888
hypothetical protein
0.8848
DUF179
0.8838
NA
0.8835
Peptidase_C1A
0.8818
hypothetical protein
0.8806
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
V_ATP_synt_C vacuolar ATP synthase 16 kDa proteolipid subunit; This model describes the vacuolar ATP synthase 16... cl00466 139.444 1.81E-42 15 - 126 specific 130170
ATP-synt_C superfamily ATP synthase subunit C; ATP synthase subunit C. - 139.444 1.81E-42 15 - 126 superfamily 260442
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available
KEGG description KEGG Pathway
Phagosome map04145
GO:0015986 GO:0016021 GO:0016469 GO:0046933 GO:0046961 GO:0016020 GO:0003936 -

ATP synthesis coupled proton transport

Details: 
The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis.
GO Category: 
BP

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

proton-transporting two-sector ATPase complex

Details: 
A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible.
GO Category: 
CC

proton-transporting ATP synthase activity, rotational mechanism

Details: 
Catalysis of the transfer of protons from one side of a membrane to the other according to the reaction: ADP + H2O + phosphate + H+(in) = ATP + H+(out), by a rotational mechanism.
GO Category: 
MF

proton-transporting ATPase activity, rotational mechanism

Details: 
Catalysis of the transfer of protons from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism.
GO Category: 
MF

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

NA

Details: 
NA
GO Category: 
NA
Log in to post comments