22620 (Tp_AP2-EREBP1) regulator [Rayko]
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
22620 chr_5 (Tp_AP2-EREBP1) regulator [Rayko] 501785 507325 + regulator [Rayko]

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0415

Most Highly Correlated Transcripts

268346

hypothetical protein
0.9324

262371

AAA_12 superfamily
0.9323

22252

hypothetical protein
0.9314

25270

hypothetical protein
0.9301

25023

Sec15 superfamily
0.929

268943

MPP_PPP_family
0.927

22723

hypothetical protein
0.9269

20865

DUF1162 superfamily
0.9257

1057

PIH1 superfamily
0.9238

23769

hypothetical protein
0.9235

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_45659 PHATRDRAFT_45659 272409 238945 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003700 GO:0005634 GO:0006355 -

GO:0003700

sequence-specific DNA binding transcription factor activity

Details: 
Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO Category: 
MF

GO:0005634

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

GO:0006355

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP

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