2309 SDR_c
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
2309 chr_2 SDR_c 680717 681557 - SDR_c

Synonyms

NCBI ID Ensembl Genomes exon ID
7450195 Thaps2309.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0186

Most Highly Correlated Transcripts

11490

hypothetical protein
0.9052

1215

E1_enzyme_family superfamily
0.9018

268293

Lactamase_B superfamily
0.8979

33667

APS2
0.8966

37118

FeThRed_B
0.8963

7089

hypothetical protein
0.8948

20768

hypothetical protein
0.8946

34100

GlcNAc superfamily
0.8941

5336

hypothetical protein
0.8936

268443

SAICAR_synt_Sc
0.8914

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SDR_c classical (c) SDRs; SDRs are a functionally diverse family of oxidoreductases that have a single... cl09931 121.622 6.67E-33 13 - 252 specific 212491
NADB_Rossmann superfamily Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD... - 121.622 6.67E-33 13 - 252 superfamily 263925
FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [... - 113.759 6.31E-30 7 - 252 multi-dom 223959

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 204626 282211 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0008152 GO:0016491 GO:0008667 -

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0008667

2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase activity

Details: 
Catalysis of the reaction: (2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate + NAD(+) = 2,3-dihydroxybenzoate + H(+) + NADH.
GO Category: 
MF

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