23111 PqqL
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
23111 chr_6 PqqL 913449 915284 - PqqL

Synonyms

NCBI ID Ensembl Genomes exon ID
7442341 Thaps23111.2, Thaps23111.1, Thaps23111.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0180

Most Highly Correlated Transcripts

261400

NA
0.9278

1773

hypothetical protein
0.923

22673

NA
0.9202

32096

GSH_gloB
0.9202

26002

2Fe-2S_thioredx
0.9155

21383

hypothetical protein
0.9137

16295

FBPase
0.9114

37934

GRX_PICOT_like
0.9087

4516

hypothetical protein
0.9074

260962

RHOD superfamily
0.9072

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PqqL Predicted Zn-dependent peptidases [General function prediction only] - 83.6633 1.31E-17 73 - 376 multi-dom 223685

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 259539 64654 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004222 GO:0006508 GO:0004240 GO:0017087 -

GO:0004222

metalloendopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
GO Category: 
MF

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0004240

NA

Details: 
NA
GO Category: 
NA

GO:0017087

mitochondrial processing peptidase complex

Details: 
A protein complex that consists of a catalytic alpha subunit (alpha-MPP) and a regulatory beta subunit (beta-MPP), and catalyzes the release of N-terminal targeting peptides from precursor proteins imported into the mitochondrion.
GO Category: 
CC

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