2317 Mito_carr
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
2317 chr_2 Mito_carr 699756 700789 + Mito_carr

Synonyms

NCBI ID Ensembl Genomes exon ID
7450199 Thaps2317.1, Thaps2317.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0135

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0255
 0.31

Most Highly Correlated Transcripts

261400

NA
0.9553

3500

hypothetical protein
0.9467

33353

TRX_family
0.9362

36764

PRK05279
0.9254

19435

PTZ00184
0.9197

263327

MFS_1
0.9145

16295

FBPase
0.9135

4502

hypothetical protein
0.9135

41655

Chloroa_b-bind
0.913

262271

PIP5K
0.9116

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 72.2819 2.88E-16 122 - 204 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 72.2819 2.88E-16 122 - 204 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 72.2819 2.88E-16 122 - 204 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 72.2819 2.88E-16 122 - 204 superfamily 249634
PTZ00168 mitochondrial carrier protein; Provisional - 68.4122 9.83E-14 53 - 293 multi-dom 185494

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_35984 PHATRDRAFT_35984 202661 Not available 451451 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005488 GO:0006810 GO:0016020 GO:0005743 -

GO:0005488

binding

Details: 
The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
GO Category: 
MF

GO:0006810

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

GO:0005743

mitochondrial inner membrane

Details: 
The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae.
GO Category: 
CC

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