19435 PTZ00184
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
19435 chr_5 PTZ00184 1543352 1543894 - PTZ00184

Synonyms

NCBI ID Ensembl Genomes exon ID
7448157 Thaps19435.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0142

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0280
 0.36

Most Highly Correlated Transcripts

32139

hypothetical protein
0.9366

1985

hypothetical protein
0.9258

bd706

(bd706) NA
0.9248

263404

Peptidase_C1 superfamily
0.9227

2317

Mito_carr
0.9197

42646

PRK04342
0.9184

21843

hypothetical protein
0.9165

15819

Arginase_HDAC superfamily
0.9155

9677

hypothetical protein
0.9141

22850

DUF4239
0.9112

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
EFh superfamily EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal... - 56.7873 1.06E-11 99 - 157 superfamily 238008
EFh superfamily EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal... - 56.7873 1.06E-11 99 - 157 superfamily 238008
EFh superfamily EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal... - 56.7873 1.06E-11 99 - 157 superfamily 238008
EFh superfamily EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal... - 56.7873 1.06E-11 99 - 157 superfamily 238008
PTZ00184 calmodulin; Provisional - 69.0198 2.32E-15 24 - 159 multi-dom 185504

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005509 -

GO:0005509

calcium ion binding

Details: 
Interacting selectively and non-covalently with calcium ions (Ca2+).
GO Category: 
MF

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