23357 PLN02779
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
23357 chr_7 PLN02779 291632 292657 - PLN02779

Synonyms

NCBI ID Ensembl Genomes exon ID
7446626 Thaps23357.2, Thaps23357.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0014

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0203
 0.30

Most Highly Correlated Transcripts

bd1474

(bd1474) phytoene_desat
0.9573

bd208

(bd208) DUF3529
0.9449

11822

hypothetical protein
0.9253

268343

NA
0.9238

bd1403

(bd1403) NA
0.9221

262977

NA
0.9201

bd1306

(bd1306) NA
0.9153

bd1645

(bd1645) tpt
0.9123

22362

(KCS1) CHS_like
0.911

258111

hypothetical protein
0.9082

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PLN02779 haloacid dehalogenase-like hydrolase family protein cl19137 412.18 2.51E-145 1 - 274 specific 215416
HAD superfamily haloacid dehalogenase-like hydrolase; haloacid dehalogenase-like hydrolase. - 412.18 2.51E-145 1 - 274 superfamily 267490
COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] - 97.1143 3.40E-24 38 - 260 multi-dom 223710

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_12969 PHATRDRAFT_12969 140882 297796 55608 Cre03.g206550.t1.2 AT3G48420.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003824 GO:0008152 -

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

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