23437 SUL1Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
23437	chr_7	SUL1	744056	750622	+	SUL1

Synonyms

NCBI ID	Ensembl Genomes exon ID
7449206	Thaps23437.6, Thaps23437.3, Thaps23437.10, Thaps23437.7, Thaps23437.1, Thaps23437.5, Thaps23437.11, Thaps23437.9, Thaps23437.2, Thaps23437.4, Thaps23437.8

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0196

Most Highly Correlated Transcripts

8262 hypothetical protein 0.9151	23450 hypothetical protein 0.891	22075 Hydrolase_like superfamily 0.8857	269183 2a30 0.8856	5586 Prenylcys_lyase superfamily 0.8843	25619 hypothetical protein 0.884
6378 hypothetical protein 0.8825	1216 hypothetical protein 0.8809	22843 hypothetical protein 0.8792	24618 hypothetical protein 0.8759

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Sulfate_transp superfamily		Sulfate transporter family; Mutations in human SLC26A2 lead to several human diseases.	-	80.7303	2.32E-16	1121 - 1384	superfamily	267603
SUL1		Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]	-	147.038	1.01E-36	1016 - 1583	multi-dom	223732

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_42556	PHATRDRAFT_42556	156935	320162	Not available	Cre01.g035950.t1.1	Not available	471623

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments