23491 COG2374
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
23491 chr_7 COG2374 1088685 1096027 - COG2374
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0168
Normalized Mean Residue
Thaps_bicluster_0010
0.38
(bd1667) Mpp10
0.8739
PLN02350
0.8545
hypothetical protein
0.8359
hypothetical protein
0.8248
hypothetical protein
0.8204
hypothetical protein
0.8192
hypothetical protein
0.8189
hypothetical protein
0.8186
hypothetical protein
0.8171
hypothetical protein
0.816
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
YhcR_OBF_like YhcR_OBF_like: A subfamily of OB-fold domains similar to the OB folds of Bacillus subtilis YhcR.... cl09930 105.42 4.70E-26 268 - 353 specific 239932
RPA_2b-aaRSs_OBF_like superfamily Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with... - 105.42 4.70E-26 268 - 353 superfamily 263924
EEP superfamily Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily; This large superfamily includes the... - 125.974 3.80E-31 539 - 859 superfamily 260458
COG2374 Predicted extracellular nuclease [General function prediction only] - 530.556 3.47E-165 7 - 859 multi-dom 225249
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available AT2G17450.1 295425
KEGG description KEGG Pathway
Not available Not available
GO:0000151 GO:0004842 GO:0008270 GO:0016567 -

ubiquitin ligase complex

Details: 
A protein complex that includes a ubiquitin-protein ligase and other proteins that may confer substrate specificity on the complex.
GO Category: 
CC

ubiquitin-protein ligase activity

Details: 
Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.
GO Category: 
MF

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

protein ubiquitination

Details: 
The process in which one or more ubiquitin groups are added to a protein.
GO Category: 
BP
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