23860 RhaT
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
23860 chr_8 RhaT 1067764 1070234 - RhaT

Synonyms

NCBI ID Ensembl Genomes exon ID
7444938 Thaps23860.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0119

Most Highly Correlated Transcripts

4108

hypothetical protein
0.983

bd1760

(bd1760) ACAD superfamily
0.8885

bd1941

(bd1941) NA
0.8632

bd1841

(bd1841) CAP10 superfamily
0.8487

bd410

(bd410) HNHc
0.8378

bd1842

(bd1842) NA
0.8066

bd1793

(bd1793) NA
0.7958

bd415

(bd415) arom_aa_hydroxylase superfamily
0.7892

bd1808

(bd1808) NA
0.77

9729

COG0398
0.7476

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
EamA EamA-like transporter family; This family includes many hypothetical membrane proteins of unknown... cl17759 59.1791 9.57E-11 412 - 527 specific 250209
EamA superfamily EamA-like transporter family; This family includes many hypothetical membrane proteins of unknown... - 59.1791 9.57E-11 412 - 527 superfamily 266818
RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and... - 82.6069 9.58E-18 198 - 528 multi-dom 223769

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 187451 114875 98337 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0016020 -

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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