24074 LRR_RI superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
24074 chr_9 LRR_RI superfamily 1060316 1061730 + LRR_RI superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7446977 Thaps24074.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0301

Most Highly Correlated Transcripts

11563

hypothetical protein
0.8832

23615

hypothetical protein
0.8732

30701

PRK05279
0.8695

1684

Ion_trans_2
0.8672

2154

hypothetical protein
0.8662

35541

Cis_IPPS
0.8585

21090

hypothetical protein
0.8583

1175

hypothetical protein
0.8573

40200

TRX_reduct
0.8562

6997

hypothetical protein
0.8546

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
LRR_RI superfamily Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue... - 82.0181 1.51E-17 63 - 291 superfamily 238064

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006605 GO:0006886 GO:0016020 -

GO:0006605

protein targeting

Details: 
The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif.
GO Category: 
BP

GO:0006886

intracellular protein transport

Details: 
The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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