24113 PRK02237
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
24113 chr_10 PRK02237 161361 163060 - PRK02237

Synonyms

NCBI ID Ensembl Genomes exon ID
7447012 Thaps24113.1, Thaps24113.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0036

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0112
 0.40

Most Highly Correlated Transcripts

12836

EEP superfamily
0.8894

22153

DnaJ
0.8834

13448

Sec1
0.8777

15417

AAA
0.8744

22409

hypothetical protein
0.8737

261400

NA
0.8734

1900

hypothetical protein
0.8686

8510

hypothetical protein
0.8666

5153

hypothetical protein
0.8627

8324

hypothetical protein
0.8625

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PRK02237 hypothetical protein; Provisional cl00757 83.3758 2.48E-19 17 - 168 specific 235016
UPF0060 superfamily Uncharacterized BCR, YnfA/UPF0060 family; Uncharacterised BCR, YnfA/UPF0060 family. - 83.3758 2.48E-19 17 - 168 superfamily 242072

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_45111 PHATRDRAFT_45111 256840 66668 446345 Cre05.g239978.t1.2 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0016020 -

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

Add comment

Log in to post comments