24233 DUF1620
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
24233 chr_10 DUF1620 886439 890188 - DUF1620

Synonyms

NCBI ID Ensembl Genomes exon ID
7446908 Thaps24233.1, Thaps24233.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0030

Most Highly Correlated Transcripts

24285

hypothetical protein
0.9161

26212

(COP2) COG5096
0.9127

269663

(COP4) SEC21
0.9032

2581

hypothetical protein
0.8958

23474

hypothetical protein
0.8938

269937

M1_APN_2
0.8853

12836

EEP superfamily
0.8836

9166

hypothetical protein
0.8826

21070

hypothetical protein
0.8798

10881

hypothetical protein
0.8797

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DUF1620 superfamily Protein of unknown function (DUF1620); These sequences are mainly derived from predicted eukaryotic... - 174.378 8.05E-49 1008 - 1194 superfamily 254420
DUF1620 superfamily Protein of unknown function (DUF1620); These sequences are mainly derived from predicted eukaryotic... - 174.378 8.05E-49 1008 - 1194 superfamily 254420

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_43900 PHATR_43900 195451 317813 470207 Cre01.g042550.t1.1 AT5G11560.1 328023

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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