2434 Ion_trans
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
2434 chr_2 Ion_trans 1001098 1002162 + Ion_trans

Synonyms

NCBI ID Ensembl Genomes exon ID
7450343 Thaps2434.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0044

Most Highly Correlated Transcripts

6997

hypothetical protein
0.9164

264002

guanyl nucleotide exchange factor
0.9087

30701

PRK05279
0.9052

23550

hypothetical protein
0.9028

7251

hypothetical protein
0.9022

1175

hypothetical protein
0.8996

25380

hypothetical protein
0.8967

8015

hypothetical protein
0.8945

3539

hypothetical protein
0.8932

24218

hypothetical protein
0.8916

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Ion_trans Ion transport protein; This family contains Sodium, Potassium, Calcium ion channels. This family is... - 112.381 1.87E-29 104 - 270 multi-dom 249927

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_43828 PHATR_43828 197260 Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005261 GO:0006812 GO:0016020 GO:0005216 GO:0006811 -

GO:0005261

cation channel activity

Details: 
Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient.
GO Category: 
MF

GO:0006812

cation transport

Details: 
The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

GO:0005216

ion channel activity

Details: 
Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism.
GO Category: 
MF

GO:0006811

ion transport

Details: 
The directed movement of charged atoms or small charged molecules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

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