24658 DUF605
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
24658 chr_13 DUF605 479385 480990 - DUF605

Synonyms

NCBI ID Ensembl Genomes exon ID
7445764 Thaps24658.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0434

Most Highly Correlated Transcripts

bd1835

(bd1835) NA
0.9119

bd1756

(bd1756) NA
0.9099

bd1839

(bd1839) NA
0.8951

270222

0.8889

bd1840

(bd1840) NA
0.8814

23630

UEV superfamily
0.8771

bd933

(bd933) NA
0.871

bd1946

(bd1946) NA
0.8661

10027

hypothetical protein
0.8499

bd153

(bd153) NA
0.8452

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DUF605 Vta1 like; Vta1 (VPS20-associated protein 1) is a positive regulator of Vps4. Vps4 is an ATPase... - 140.968 2.34E-38 14 - 397 multi-dom 252721

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_47496 PHATRDRAFT_47496 224213 182688 Not available Cre03.g145227.t1.1 AT4G26750.1 475194

KEGG

KEGG description KEGG Pathway
Endocytosis map04144

GO Terms

Not available -

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