24726 PLN00113Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
24726	chr_13	PLN00113	922049	923737	-	PLN00113

Synonyms

NCBI ID	Ensembl Genomes exon ID
7450519	Thaps24726.3, Thaps24726.4, Thaps24726.2, Thaps24726.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0300

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0030	0.47	0.00000015 1000

Most Highly Correlated Transcripts

7865 hypothetical protein 0.8209	bd835 (bd835) DUF4137 0.797	37322 PKc_like superfamily 0.763	6211 hypothetical protein 0.7489	5110 hypothetical protein 0.7397	12179 hypothetical protein 0.7185
26041 hypothetical protein 0.7107	21020 hypothetical protein 0.7056	24858 hypothetical protein 0.705	2070 hypothetical protein 0.6995

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PLN00113		leucine-rich repeat receptor-like protein kinase; Provisional	-	78.3512	1.04E-15	234 - 394	multi-dom	215061

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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