25128 Thioredoxin_like superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
25128	chr_16a	Thioredoxin_like superfamily	208749	209919	+	Thioredoxin_like superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7449988	Thaps25128.3, Thaps25128.2, Thaps25128.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0199

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0263	0.34	0.55 17

Most Highly Correlated Transcripts

17961 BI-1-like superfamily 0.8649	261608 PLN02585 0.8622	10885 hypothetical protein 0.8598	1926 hypothetical protein 0.8515	928 LPLAT superfamily 0.8443	25127 hypothetical protein 0.843
270222 0.8391	1788 hypothetical protein 0.8388	22860 hypothetical protein 0.8381	6979 GATase1_Hsp31_like 0.8362

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Thioredoxin_like superfamily		Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold; The thioredoxin (TRX...	-	148.588	6.49E-45	29 - 143	superfamily	260398

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_45921	PHATRDRAFT_45921	271054	323095	436388	Cre02.g093750.t1.2	AT1G60420.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0005489 GO:0006118 -

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