25205 Beta_propelThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
25205	chr_17	Beta_propel	60382	63551	+	Beta_propel

Synonyms

NCBI ID	Ensembl Genomes exon ID
7453110	Thaps25205.3, Thaps25205.2, Thaps25205.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0302

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0273	0.40	0.4 55

Most Highly Correlated Transcripts

10552 Beta_propel 0.9631	24858 hypothetical protein 0.8385	28825 Chitin_synth_C 0.8376	25357 hypothetical protein 0.8335	7865 hypothetical protein 0.8265	bd1692 (bd1692) NA 0.8262
23932 hypothetical protein 0.8209	25280 hypothetical protein 0.8088	2243 hypothetical protein 0.8083	6591 GluZincin superfamily 0.8037

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Beta_propel		Beta propeller domain; Members of this family comprise secreted bacterial proteins containing C-...	-	228.329	3.59E-65	299 - 881	multi-dom	255588

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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