25279 TCP1_zeta
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
25279 chr_17 TCP1_zeta 414894 416787 + TCP1_zeta

Synonyms

NCBI ID Ensembl Genomes exon ID
7442127 Thaps25279.1, Thaps25279.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0290

Most Highly Correlated Transcripts

36007

Aldolase_II superfamily
0.9293

35136

NA
0.925

21723

DnaJ
0.9046

268296

(RM12) Ribosomal_L7_L12
0.9014

32216

(RT5) rpsE_bact
0.9009

13393

PLN02321
0.9009

38149

Acatn superfamily
0.9004

261607

IF4E
0.8989

6028

NA
0.8987

28682

TCP1_theta
0.8986

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TCP1_zeta TCP-1 (CTT or eukaryotic type II) chaperonin family, zeta subunit. Chaperonins are involved in... cl02777 815.341 0 7 - 536 specific 239458
chaperonin_like superfamily chaperonin_like superfamily. Chaperonins are involved in productive folding of proteins. They share... - 815.341 0 7 - 536 superfamily 261443

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_22666 PHATRDRAFT_22666 181767 307780 433378 Cre09.g397200.t1.2 AT5G16070.1 553558

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005515 GO:0005524 GO:0044267 -

GO:0005515

protein binding

Details: 
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0044267

cellular protein metabolic process

Details: 
The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes cellular protein modification.
GO Category: 
BP

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