13393 PLN02321
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
13393 chr_1 PLN02321 2057493 2059557 + PLN02321
NCBI ID Ensembl Genomes exon ID
Not available Thaps13393.2, Thaps13393.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0052
hypothetical protein
1
hypothetical protein
0.9355
Methyltransf_22
0.9316
hypothetical protein
0.9226
TetR_N superfamily
0.9222
hypothetical protein
0.9202
hypothetical protein
0.9182
phr2
0.9181
DadA
0.9174
S49_Sppa_N_C
0.9164
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DRE_TIM_IPMS 2-isopropylmalate synthase (IPMS), N-terminal catalytic TIM barrel domain; 2-isopropylmalate... cl18962 480.407 1.31E-166 88 - 373 specific 163678
DRE_TIM_metallolyase superfamily DRE-TIM metallolyase superfamily; The DRE-TIM metallolyase superfamily includes 2-isopropylmalate... - 480.407 1.31E-166 88 - 373 superfamily 267315
LeuA_dimer LeuA allosteric (dimerisation) domain; This is the C-terminal regulatory (R) domain of alpha-... cl07212 118.356 4.08E-31 475 - 622 specific 214910
LeuA_dimer superfamily LeuA allosteric (dimerization) domain; This is the C-terminal regulatory (R) domain of alpha-... - 118.356 4.08E-31 475 - 622 superfamily 263229
PLN02321 2-isopropylmalate synthase - 1055.34 0 1 - 645 multi-dom 215182
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_44618 PHATRDRAFT_44618 277320 236620 427029 Cre06.g258733.t2.1 AT1G74040.1 552331
KEGG description KEGG Pathway
Not available Not available
GO:0003824 GO:0019752 GO:0046912 GO:0003852 GO:0009098 -

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

carboxylic acid metabolic process

Details: 
The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-).
GO Category: 
BP

transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer

Details: 
Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor), with the acyl group being converted into alkyl on transfer.
GO Category: 
MF

2-isopropylmalate synthase activity

Details: 
Catalysis of the reaction: 3-methyl-2-oxobutanoate + acetyl-CoA + H(2)O = (2S)-2-isopropylmalate + CoA + H(+).
GO Category: 
MF

leucine biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of leucine, 2-amino-4-methylpentanoic acid.
GO Category: 
BP
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